Journal of Baltic Science Education (ISSN 1648-3898) is abstracted/indexed/cited/listed in:

• Social Scisearch (Clarivate Analytics)
• Essential Science Indicators (Clarivate Analytics)
• Education Resource Information Center (ERIC) (from 2015)
• ProQuest (ProQuest Central; ProQuest Education Journals)
• Index Copernicus
• EBSCO: Academic Search Complete
• EBSCO: Education Research Complete
• EBSCO MegaFILE (from 2002)
• EBSCO: Academic Search Alumni Edition (from 2002)
• EBSCO: Advanced Placement Source (from 2002)
• Central & Eastern European Academic Source Database Coverage List (EBSCO-CEEAS)
• TOC Premier (from 2002)
• JournalSeek (from 2002)
• John Lamp's IS Pages: ERA journals in a Field of Research
• Contemporary Science Association/AAP databases (from 2012)
• Included into a List of Journals Recognized by Polish Ministry of Science and Higher Education (from 2012)
• SCOPUS (from 2008)
• Open Academic Journals Index (OAJI) (from 2014)
• Information Matrix for the Analysis of Journals (MIAR)
• Directory of Open Access Scholarly Resources (ROAD)
• World Catalogue of Scientific Journals (WCOSJ)
• ResearchGate
• Crossref
• The Wroblewski Library of the Lithuanian Academy of Sciences
• The Scientific Literature Database (Scilit)
• Dimensions
• SOBIAD Citation Index
• Internet Archive
• CIRC EC3METRICS
• ScienceGate